IL_6GZ5_246

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACUAG*CUUCUU

Length

11 nucleotides

Bulged bases

6GZ5|1|B1|C|1403, 6GZ5|1|B1|U|1404

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|B1|A|1402
6GZ5|1|B1|C|1403
6GZ5|1|B1|U|1404
6GZ5|1|B1|A|1405
6GZ5|1|B1|G|1406
*
6GZ5|1|B1|C|1440
6GZ5|1|B1|U|1441
6GZ5|1|B1|U|1442
6GZ5|1|B1|C|1443
6GZ5|1|B1|U|1444
6GZ5|1|B1|U|1445

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BQ

ribosomal protein uS9

Chain BU

ribosomal protein uS10