IL_6GZ5_265

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AUUCAACCC*GGGCGCAU

Length

17 nucleotides

Bulged bases

6GZ5|1|A2|C|678, 6GZ5|1|A2|G|679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|A2|A|460
6GZ5|1|A2|U|461
6GZ5|1|A2|U|462
6GZ5|1|A2|C|463
6GZ5|1|A2|A|464
6GZ5|1|A2|A|465
6GZ5|1|A2|C|466
6GZ5|1|A2|C|467
6GZ5|1|A2|C|468
*
6GZ5|1|A2|G|675
6GZ5|1|A2|G|676
6GZ5|1|A2|G|677
6GZ5|1|A2|C|678
6GZ5|1|A2|G|679
6GZ5|1|A2|C|680
6GZ5|1|A2|A|681
6GZ5|1|A2|U|682

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AE

ribosomal protein eL6

Chain At

ribosomal protein eL28