IL_6GZ5_266

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCCG*CCGGCGAC

Length

13 nucleotides

Bulged bases

6GZ5|1|A2|C|660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|A2|G|481
6GZ5|1|A2|G|482
6GZ5|1|A2|C|483
6GZ5|1|A2|C|484
6GZ5|1|A2|G|485
*
6GZ5|1|A2|C|656
6GZ5|1|A2|C|657
6GZ5|1|A2|G|658
6GZ5|1|A2|G|659
6GZ5|1|A2|C|660
6GZ5|1|A2|G|661
6GZ5|1|A2|A|662
6GZ5|1|A2|C|663

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

ribosomal protein uL4

Chain At

ribosomal protein eL28