IL_6GZ5_286

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|B1|G|807
6GZ5|1|B1|A|808
6GZ5|1|B1|A|809
6GZ5|1|B1|A|810
6GZ5|1|B1|A|811
6GZ5|1|B1|A|812
6GZ5|1|B1|A|813
6GZ5|1|B1|U|814
6GZ5|1|B1|U|815
6GZ5|1|B1|A|816
*
6GZ5|1|B1|U|848
6GZ5|1|B1|A|849
6GZ5|1|B1|C|850
6GZ5|1|B1|C|851
6GZ5|1|B1|G|852
6GZ5|1|B1|C|853
6GZ5|1|B1|A|854
6GZ5|1|B1|G|855
6GZ5|1|B1|C|856

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BE

ribosomal protein eS4

Chain BJ

ribosomal protein uS4

Chain BL

ribosomal protein uS17

Chain BW

ribosomal protein uS8