IL_6GZQ_015
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_015 not in the Motif Atlas
- Geometric match to IL_4WF9_024
- Geometric discrepancy: 0.1305
- The information below is about IL_4WF9_024
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
6GZQ|1|A1|U|752
6GZQ|1|A1|G|753
6GZQ|1|A1|A|754
6GZQ|1|A1|A|755
6GZQ|1|A1|G|756
*
6GZQ|1|A1|U|773
6GZQ|1|A1|G|774
6GZQ|1|A1|G|775
6GZQ|1|A1|A|776
6GZQ|1|A1|G|777
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain C1
- 50S ribosomal protein L2
Coloring options: