IL_6GZQ_031
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 6GZQ|1|A1|A|1175, 6GZQ|1|A1|U|1178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_031 not in the Motif Atlas
- Homologous match to IL_7A0S_037
- Geometric discrepancy: 0.1591
- The information below is about IL_7A0S_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
6GZQ|1|A1|G|1072
6GZQ|1|A1|G|1073
6GZQ|1|A1|U|1074
6GZQ|1|A1|A|1075
6GZQ|1|A1|A|1076
6GZQ|1|A1|A|1077
6GZQ|1|A1|G|1078
*
6GZQ|1|A1|C|1172
6GZQ|1|A1|G|1173
6GZQ|1|A1|A|1174
6GZQ|1|A1|A|1175
6GZQ|1|A1|A|1176
6GZQ|1|A1|A|1177
6GZQ|1|A1|U|1178
6GZQ|1|A1|G|1179
6GZQ|1|A1|A|1180
6GZQ|1|A1|U|1181
6GZQ|1|A1|C|1182
6GZQ|1|A1|G|1183
6GZQ|1|A1|G|1184
6GZQ|1|A1|G|1185
6GZQ|1|A1|G|1186
6GZQ|1|A1|C|1187
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain D1
- 50S ribosomal protein L3
- Chain I1
- 50S ribosomal protein L13
- Chain L1
- 50S ribosomal protein L16
- Chain e1
- 50S ribosomal protein L36
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