IL_6GZQ_044

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

6GZQ|1|A1|G|1608

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6GZQ_044 not in the Motif Atlas

Homologous match to IL_7RQB_056

Geometric discrepancy: 0.2517

The information below is about IL_7RQB_056

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

6GZQ|1|A1|U|1481
6GZQ|1|A1|A|1482
6GZQ|1|A1|G|1483
*
6GZQ|1|A1|C|1606
6GZQ|1|A1|A|1607
6GZQ|1|A1|G|1608
6GZQ|1|A1|G|1609

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2