IL_6GZQ_069

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CCUGCGUAGGAUAGG*CCCUGG

Length

21 nucleotides

Bulged bases

6GZQ|1|A1|C|2135, 6GZQ|1|A1|U|2137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|C|2131
6GZQ|1|A1|C|2132
6GZQ|1|A1|U|2133
6GZQ|1|A1|G|2134
6GZQ|1|A1|C|2135
6GZQ|1|A1|G|2136
6GZQ|1|A1|U|2137
6GZQ|1|A1|A|2138
6GZQ|1|A1|G|2139
6GZQ|1|A1|G|2140
6GZQ|1|A1|A|2141
6GZQ|1|A1|U|2142
6GZQ|1|A1|A|2143
6GZQ|1|A1|G|2144
6GZQ|1|A1|G|2145
*
6GZQ|1|A1|C|2201
6GZQ|1|A1|C|2202
6GZQ|1|A1|C|2203
6GZQ|1|A1|U|2204
6GZQ|1|A1|G|2205
6GZQ|1|A1|G|2206

Current chains

Chain A1

23S ribosomal RNA

Nearby chains