IL_6GZQ_071
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_071 not in the Motif Atlas
- Homologous match to IL_7RQB_089
- Geometric discrepancy: 0.1329
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
6GZQ|1|A1|C|2364
6GZQ|1|A1|G|2365
6GZQ|1|A1|A|2366
6GZQ|1|A1|G|2367
*
6GZQ|1|A1|C|2378
6GZQ|1|A1|G|2379
6GZQ|1|A1|A|2380
6GZQ|1|A1|G|2381
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain V1
- 50S ribosomal protein L27
- Chain d1
- 50S ribosomal protein L35
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