IL_6GZQ_112

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GCGUGUAGG*CUGAGGCGC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A2|G|560
6GZQ|1|A2|C|561
6GZQ|1|A2|G|562
6GZQ|1|A2|U|563
6GZQ|1|A2|G|564
6GZQ|1|A2|U|565
6GZQ|1|A2|A|566
6GZQ|1|A2|G|567
6GZQ|1|A2|G|568
*
6GZQ|1|A2|C|739
6GZQ|1|A2|U|740
6GZQ|1|A2|G|741
6GZQ|1|A2|A|742
6GZQ|1|A2|G|743
6GZQ|1|A2|G|744
6GZQ|1|A2|C|745
6GZQ|1|A2|G|746
6GZQ|1|A2|C|747

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain A1

Large subunit ribosomal RNA; LSU rRNA

Chain H2

30S ribosomal protein S8

Chain L2

30S ribosomal protein S12

Chain O2

30S ribosomal protein S15

Chain Q2

30S ribosomal protein S17