3D structure

PDB id
6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.28 Å

Loop

Sequence
CUGGGGCG*CGCUCAG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZQ|1|A2|C|573
6GZQ|1|A2|U|574
6GZQ|1|A2|G|575
6GZQ|1|A2|G|576
6GZQ|1|A2|G|577
6GZQ|1|A2|G|578
6GZQ|1|A2|C|579
6GZQ|1|A2|G|580
*
6GZQ|1|A2|C|626
6GZQ|1|A2|G|627
6GZQ|1|A2|C|628
6GZQ|1|A2|U|629
6GZQ|1|A2|C|630
6GZQ|1|A2|A|631
6GZQ|1|A2|G|632

Current chains

Chain A2
16S ribosomal RNA

Nearby chains

Chain H2
30S ribosomal protein S8
Chain O2
30S ribosomal protein S15
Chain Q2
30S ribosomal protein S17

Coloring options:

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