IL_6GZQ_129
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CCAC*GGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_129 not in the Motif Atlas
- Geometric match to IL_5J7L_256
- Geometric discrepancy: 0.3096
- The information below is about IL_5J7L_256
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
6GZQ|1|A2|C|1240
6GZQ|1|A2|C|1241
6GZQ|1|A2|A|1242
6GZQ|1|A2|C|1243
*
6GZQ|1|A2|G|1254
6GZQ|1|A2|G|1255
6GZQ|1|A2|A|1256
6GZQ|1|A2|G|1257
Current chains
- Chain A2
- 16S ribosomal RNA
Nearby chains
- Chain U2
- 30S ribosomal protein Thx
Coloring options: