IL_6GZQ_148

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UCGGACACCGAAUCCCCAG*UGGGGGGAUAGGUGA

Length

34 nucleotides

Bulged bases

6GZQ|1|A1|A|308, 6GZQ|1|A1|C|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|U|297
6GZQ|1|A1|C|298
6GZQ|1|A1|G|299
6GZQ|1|A1|G|300
6GZQ|1|A1|A|301
6GZQ|1|A1|C|302
6GZQ|1|A1|A|303
6GZQ|1|A1|C|304
6GZQ|1|A1|C|305
6GZQ|1|A1|G|306
6GZQ|1|A1|A|307
6GZQ|1|A1|A|308
6GZQ|1|A1|U|309
6GZQ|1|A1|C|310
6GZQ|1|A1|C|311
6GZQ|1|A1|C|312
6GZQ|1|A1|C|313
6GZQ|1|A1|A|314
6GZQ|1|A1|G|315
*
6GZQ|1|A1|U|375
6GZQ|1|A1|G|376
6GZQ|1|A1|G|377
6GZQ|1|A1|G|378
6GZQ|1|A1|G|379
6GZQ|1|A1|G|380
6GZQ|1|A1|G|381
6GZQ|1|A1|A|382
6GZQ|1|A1|U|383
6GZQ|1|A1|A|384
6GZQ|1|A1|G|385
6GZQ|1|A1|G|386
6GZQ|1|A1|U|387
6GZQ|1|A1|G|388
6GZQ|1|A1|A|389

Current chains

Chain A1

23S ribosomal RNA

Nearby chains