IL_6GZQ_154

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CCGAUGC*GUAAGG

Length

13 nucleotides

Bulged bases

6GZQ|1|A1|U|1252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|C|1248
6GZQ|1|A1|C|1249
6GZQ|1|A1|G|1250
6GZQ|1|A1|A|1251
6GZQ|1|A1|U|1252
6GZQ|1|A1|G|1253
6GZQ|1|A1|C|1254
*
6GZQ|1|A1|G|1287
6GZQ|1|A1|U|1288
6GZQ|1|A1|A|1289
6GZQ|1|A1|A|1290
6GZQ|1|A1|G|1291
6GZQ|1|A1|G|1292

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain E1

50S ribosomal protein L4

Chain K1

50S ribosomal protein L15

Chain P1

50S ribosomal protein L20