IL_6GZQ_165

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGGGG*UCCCAAG

Length

12 nucleotides

Bulged bases

6GZQ|1|A1|A|2556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|U|2536
6GZQ|1|A1|G|2537
6GZQ|1|A1|G|2538
6GZQ|1|A1|G|2539
6GZQ|1|A1|G|2540
*
6GZQ|1|A1|U|2551
6GZQ|1|A1|C|2552
6GZQ|1|A1|C|2553
6GZQ|1|A1|C|2554
6GZQ|1|A1|A|2555
6GZQ|1|A1|A|2556
6GZQ|1|A1|G|2557

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain G1

50S ribosomal protein L6

Chain I1

50S ribosomal protein L13

Chain e1

50S ribosomal protein L36