IL_6GZQ_169
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GACCC*GUGUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_169 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3267
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
6GZQ|1|A2|G|178
6GZQ|1|A2|A|179
6GZQ|1|A2|C|180
6GZQ|1|A2|C|181
6GZQ|1|A2|C|182
*
6GZQ|1|A2|G|195
6GZQ|1|A2|U|196
6GZQ|1|A2|G|197
6GZQ|1|A2|U|198
6GZQ|1|A2|C|199
Current chains
- Chain A2
- 16S ribosomal RNA
Nearby chains
- Chain T2
- 30S ribosomal protein S20
Coloring options: