IL_6GZQ_173

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGAAAGACC*GGGGGAG

Length

16 nucleotides

Bulged bases

6GZQ|1|A2|G|613, 6GZQ|1|A2|G|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A2|U|588
6GZQ|1|A2|G|589
6GZQ|1|A2|A|590
6GZQ|1|A2|A|591
6GZQ|1|A2|A|592
6GZQ|1|A2|G|593
6GZQ|1|A2|A|594
6GZQ|1|A2|C|595
6GZQ|1|A2|C|596
*
6GZQ|1|A2|G|610
6GZQ|1|A2|G|611
6GZQ|1|A2|G|612
6GZQ|1|A2|G|613
6GZQ|1|A2|G|614
6GZQ|1|A2|A|615
6GZQ|1|A2|G|616

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain D2

30S ribosomal protein S4

Chain H2

30S ribosomal protein S8

Chain P2

30S ribosomal protein S16