IL_6GZQ_176

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GCUGCAUG*CAUGGC

Length

14 nucleotides

Bulged bases

6GZQ|1|A2|C|1036

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A2|G|1032
6GZQ|1|A2|C|1033
6GZQ|1|A2|U|1034
6GZQ|1|A2|G|1035
6GZQ|1|A2|C|1036
6GZQ|1|A2|A|1037
6GZQ|1|A2|U|1038
6GZQ|1|A2|G|1039
*
6GZQ|1|A2|C|1184
6GZQ|1|A2|A|1185
6GZQ|1|A2|U|1186
6GZQ|1|A2|G|1187
6GZQ|1|A2|G|1188
6GZQ|1|A2|C|1189

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain C2

30S ribosomal protein S3

Chain J2

30S ribosomal protein S10

Chain N2

30S ribosomal protein S14 type Z

Chain V2

Ribosome hibernation promoting factor