IL_6GZQ_180

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CACG*CGAAG

Length

9 nucleotides

Bulged bases

6GZQ|1|A2|A|1469, 6GZQ|1|A2|A|1470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A2|C|1389
6GZQ|1|A2|A|1390
6GZQ|1|A2|C|1391
6GZQ|1|A2|G|1392
*
6GZQ|1|A2|C|1467
6GZQ|1|A2|G|1468
6GZQ|1|A2|A|1469
6GZQ|1|A2|A|1470
6GZQ|1|A2|G|1471

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain A1

Large subunit ribosomal RNA; LSU rRNA

Chain L2

30S ribosomal protein S12

Chain V2

Ribosome hibernation promoting factor