3D structure

PDB id
6H4N (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CCUGAAUC*GUGAG
Length
13 nucleotides
Bulged bases
6H4N|1|A|U|276
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6H4N_009 not in the Motif Atlas
Homologous match to IL_5J7L_253
Geometric discrepancy: 0.4969
The information below is about IL_5J7L_253
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_77870.1
Basepair signature
cWW-L-R-L-tHS-L-cWW-L-cWW
Number of instances in this motif group
2

Unit IDs

6H4N|1|A|C|274
6H4N|1|A|C|275
6H4N|1|A|U|276
6H4N|1|A|G|277
6H4N|1|A|A|278
6H4N|1|A|A|279
6H4N|1|A|U|280
6H4N|1|A|C|281
*
6H4N|1|A|G|359
6H4N|1|A|U|360
6H4N|1|A|G|361
6H4N|1|A|A|362
6H4N|1|A|G|363

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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