IL_6H4N_084

3D structure

PDB id

6H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGG*CGACCUUGAAAUAC

Length

19 nucleotides

Bulged bases

6H4N|1|A|A|2171, 6H4N|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H4N|1|A|G|2124
6H4N|1|A|G|2125
6H4N|1|A|A|2126
6H4N|1|A|G|2127
6H4N|1|A|G|2128
*
6H4N|1|A|C|2161
6H4N|1|A|G|2162
6H4N|1|A|A|2163
6H4N|1|A|C|2164
6H4N|1|A|C|2165
6H4N|1|A|U|2166
6H4N|1|A|U|2167
6H4N|1|A|G|2168
6H4N|1|A|A|2169
6H4N|1|A|A|2170
6H4N|1|A|A|2171
6H4N|1|A|U|2172
6H4N|1|A|A|2173
6H4N|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain w

Transfer RNA; tRNA