IL_6HCT_001
3D structure
- PDB id
- 6HCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Archeoglobus fulgidus L7Ae bound to its cognate UTR k-turn
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.09 Å
Loop
- Sequence
- CCGAUGAAU*AUGAAG
- Length
- 15 nucleotides
- Bulged bases
- 6HCT|1|A|U|6
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_64900.1
- Basepair signature
- cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6HCT|1|A|C|2
6HCT|1|A|C|3
6HCT|1|A|G|4
6HCT|1|A|A|5
6HCT|1|A|U|6
6HCT|1|A|G|7
6HCT|1|A|A|8
6HCT|1|A|A|9
6HCT|1|A|U|10
*
6HCT|1|B|A|13
6HCT|1|B|U|14
6HCT|1|B|G|15
6HCT|1|B|A|16
6HCT|1|B|A|17
6HCT|1|B|G|18
Current chains
- Chain A
- RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3')
- Chain B
- RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3')
Nearby chains
- Chain C
- 50S ribosomal protein L7Ae
- Chain E
- RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*G)-3')
- Chain F
- RNA (5'-R(P*CP*AP*UP*GP*AP*AP*GP*C)-3')
Coloring options: