IL_6HHQ_063
3D structure
- PDB id
- 6HHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound C45 bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGGCCUGAUUUUAUGCAGGCCACCAU
- Length
- 40 nucleotides
- Bulged bases
- 6HHQ|1|1|C|1556, 6HHQ|1|1|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HHQ|1|1|A|1537
6HHQ|1|1|G|1538
6HHQ|1|1|A|1539
6HHQ|1|1|U|1540
6HHQ|1|1|G|1541
6HHQ|1|1|G|1542
*
6HHQ|1|1|C|1551
6HHQ|1|1|G|1552
6HHQ|1|1|U|1553
6HHQ|1|1|U|1554
6HHQ|1|1|U|1555
6HHQ|1|1|C|1556
6HHQ|1|1|A|1557
6HHQ|1|1|A|1558
6HHQ|1|1|A|1559
6HHQ|1|1|G|1560
6HHQ|1|1|G|1561
6HHQ|1|1|C|1562
6HHQ|1|1|C|1563
6HHQ|1|1|U|1564
6HHQ|1|1|G|1565
6HHQ|1|1|A|1566
6HHQ|1|1|U|1567
6HHQ|1|1|U|1568
6HHQ|1|1|U|1569
6HHQ|1|1|U|1570
6HHQ|1|1|A|1571
6HHQ|1|1|U|1572
6HHQ|1|1|G|1573
6HHQ|1|1|C|1574
6HHQ|1|1|A|1575
6HHQ|1|1|G|1576
6HHQ|1|1|G|1577
6HHQ|1|1|C|1578
6HHQ|1|1|C|1579
6HHQ|1|1|A|1580
6HHQ|1|1|C|1581
6HHQ|1|1|C|1582
6HHQ|1|1|A|1583
6HHQ|1|1|U|1584
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain 8
- 60S ribosomal protein L25
- Chain AK
- 60S ribosomal protein L37-A
- Chain j
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L8-A
- Chain v
- 60S ribosomal protein L15-A
Coloring options: