IL_6HHQ_402
3D structure
- PDB id
- 6HHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound C45 bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUA*UAAU
- Length
- 7 nucleotides
- Bulged bases
- 6HHQ|1|sR|A|506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HHQ_402 not in the Motif Atlas
- Geometric match to IL_5M0H_001
- Geometric discrepancy: 0.2618
- The information below is about IL_5M0H_001
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6HHQ|1|sR|A|481
6HHQ|1|sR|U|482
6HHQ|1|sR|A|483
*
6HHQ|1|sR|U|504
6HHQ|1|sR|A|505
6HHQ|1|sR|A|506
6HHQ|1|sR|U|507
Current chains
- Chain sR
- 18S ribosomal RNA
Nearby chains
- Chain e0
- 40S ribosomal protein S30-A
- Chain s9
- 40S ribosomal protein S9-A
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