IL_6HHQ_474

3D structure

PDB id

6HHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of compound C45 bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAUGGCC*GUGCUGG

Length

14 nucleotides

Bulged bases

6HHQ|1|A|U|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HHQ|1|A|C|270
6HHQ|1|A|A|271
6HHQ|1|A|U|272
6HHQ|1|A|G|273
6HHQ|1|A|G|274
6HHQ|1|A|C|275
6HHQ|1|A|C|276
*
6HHQ|1|A|G|279
6HHQ|1|A|U|280
6HHQ|1|A|G|281
6HHQ|1|A|C|282
6HHQ|1|A|U|283
6HHQ|1|A|G|284
6HHQ|1|A|G|285

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain H

40S ribosomal protein S6-A