IL_6HHQ_486
3D structure
- PDB id
- 6HHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound C45 bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AGCCAGCGA*UUGUGAAACU
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HHQ|1|A|A|1479
6HHQ|1|A|G|1480
6HHQ|1|A|C|1481
6HHQ|1|A|C|1482
6HHQ|1|A|A|1483
6HHQ|1|A|G|1484
6HHQ|1|A|C|1485
6HHQ|1|A|G|1486
6HHQ|1|A|A|1487
*
6HHQ|1|A|U|1519
6HHQ|1|A|U|1520
6HHQ|1|A|G|1521
6HHQ|1|A|U|1522
6HHQ|1|A|G|1523
6HHQ|1|A|A|1524
6HHQ|1|A|A|1525
6HHQ|1|A|A|1526
6HHQ|1|A|C|1527
6HHQ|1|A|U|1528
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S3
- Chain G
- 40S ribosomal protein S5
- Chain R
- 40S ribosomal protein S16-A
- Chain U
- 40S ribosomal protein S19-A
- Chain V
- 40S ribosomal protein S20
- Chain a
- 40S ribosomal protein S25-A
- Chain e
- 40S ribosomal protein S29-A
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