IL_6I0Y_009

3D structure

PDB id

6I0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I0Y_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2355

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6I0Y|1|A|C|274
6I0Y|1|A|C|275
6I0Y|1|A|U|276
6I0Y|1|A|G|277
6I0Y|1|A|A|278
6I0Y|1|A|A|279
6I0Y|1|A|U|280
6I0Y|1|A|C|281
*
6I0Y|1|A|G|359
6I0Y|1|A|U|360
6I0Y|1|A|G|361
6I0Y|1|A|A|362
6I0Y|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains