IL_6I0Y_076

3D structure

PDB id

6I0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAAAUUCCUUG*CCUG

Length

16 nucleotides

Bulged bases

6I0Y|1|A|A|1938, 6I0Y|1|A|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I0Y_076 not in the Motif Atlas

Geometric match to IL_7A0S_072

Geometric discrepancy: 0.1296

The information below is about IL_7A0S_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

6I0Y|1|A|C|1934
6I0Y|1|A|G|1935
6I0Y|1|A|A|1936
6I0Y|1|A|A|1937
6I0Y|1|A|A|1938
6I0Y|1|A|U|1939
6I0Y|1|A|U|1940
6I0Y|1|A|C|1941
6I0Y|1|A|C|1942
6I0Y|1|A|U|1943
6I0Y|1|A|U|1944
6I0Y|1|A|G|1945
*
6I0Y|1|A|C|1961
6I0Y|1|A|C|1962
6I0Y|1|A|U|1963
6I0Y|1|A|G|1964

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2