IL_6I0Y_115

3D structure

PDB id

6I0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCC*GCGG

Length

7 nucleotides

Bulged bases

6I0Y|1|A|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I0Y_115 not in the Motif Atlas

Geometric match to IL_7MLW_001

Geometric discrepancy: 0.2829

The information below is about IL_7MLW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

6I0Y|1|A|C|1726
6I0Y|1|A|C|1727
6I0Y|1|A|C|1728
*
6I0Y|1|A|G|1731
6I0Y|1|A|C|1732
6I0Y|1|A|G|1733
6I0Y|1|A|G|1734

Current chains

Chain A

23S ribosomal RNA

Nearby chains