IL_6I1K_005

3D structure

PDB id

6I1K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of catalytically inactive FnCas12a in complex with a crRNA guide and a dsDNA target

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GAC*GTC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I1K|1|C|DG|5
6I1K|1|C|DA|6
6I1K|1|C|DC|7
*
6I1K|1|D|DG|-7
6I1K|1|D|DT|-6
6I1K|1|D|DC|-5

Current chains

Chain C

DNA target strand (38-MER)

Chain D

DNA non-target strand (33-MER)

Nearby chains

Chain A

CRISPR-associated endonuclease Cas12a