IL_6I7V_003

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUAAC*GGG

Length

9 nucleotides

Bulged bases

6I7V|1|AA|C|48, 6I7V|1|AA|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_003 not in the Motif Atlas

Homologous match to IL_5J7L_003

Geometric discrepancy: 0.0914

The information below is about IL_5J7L_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14177.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

6I7V|1|AA|C|47
6I7V|1|AA|C|48
6I7V|1|AA|U|49
6I7V|1|AA|A|50
6I7V|1|AA|A|51
6I7V|1|AA|C|52
*
6I7V|1|AA|G|359
6I7V|1|AA|G|360
6I7V|1|AA|G|361

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AL

30S ribosomal protein S12