IL_6I7V_019

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

6I7V|1|AA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_019 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1228

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

6I7V|1|AA|U|409
6I7V|1|AA|G|410
6I7V|1|AA|A|411
6I7V|1|AA|A|412
6I7V|1|AA|G|413
6I7V|1|AA|A|414
6I7V|1|AA|A|415
6I7V|1|AA|G|416
*
6I7V|1|AA|U|427
6I7V|1|AA|G|428
6I7V|1|AA|U|429
6I7V|1|AA|A|430
6I7V|1|AA|A|431
6I7V|1|AA|A|432
6I7V|1|AA|G|433

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AD

30S ribosomal protein S4