IL_6I7V_021

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAGG*CGUUAC

Length

11 nucleotides

Bulged bases

6I7V|1|AA|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_021 not in the Motif Atlas

Homologous match to IL_5J7L_022

Geometric discrepancy: 0.1163

The information below is about IL_5J7L_022

Detailed Annotation

tSH-tHW-tWW

Broad Annotation

No text annotation

Motif group

IL_88269.4

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

6I7V|1|AA|G|446
6I7V|1|AA|G|447
6I7V|1|AA|A|448
6I7V|1|AA|G|449
6I7V|1|AA|G|450
*
6I7V|1|AA|C|483
6I7V|1|AA|G|484
6I7V|1|AA|U|485
6I7V|1|AA|U|486
6I7V|1|AA|A|487
6I7V|1|AA|C|488

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AP

30S ribosomal protein S16