IL_6I7V_054

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGACC*GCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_054 not in the Motif Atlas

Homologous match to IL_5J7L_056

Geometric discrepancy: 0.1576

The information below is about IL_5J7L_056

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6I7V|1|AA|C|1259
6I7V|1|AA|G|1260
6I7V|1|AA|A|1261
6I7V|1|AA|C|1262
6I7V|1|AA|C|1263
*
6I7V|1|AA|G|1272
6I7V|1|AA|C|1273
6I7V|1|AA|A|1274
6I7V|1|AA|A|1275
6I7V|1|AA|G|1276

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AN

30S ribosomal protein S14