IL_6I7V_110

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_110 not in the Motif Atlas

Homologous match to IL_4LFB_047

Geometric discrepancy: 0.1334

The information below is about IL_4LFB_047

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

6I7V|1|BA|G|1061
6I7V|1|BA|U|1062
6I7V|1|BA|C|1063
*
6I7V|1|BA|G|1193
6I7V|1|BA|U|1194
6I7V|1|BA|C|1195

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BE

30S ribosomal protein S5

Chain BI

30S ribosomal protein S9

Chain BJ

30S ribosomal protein S10

Chain BN

30S ribosomal protein S14