IL_6I7V_145

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

6I7V|1|CA|G|776, 6I7V|1|CA|A|788, 6I7V|1|CA|A|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_145 not in the Motif Atlas

Homologous match to IL_7RQB_023

Geometric discrepancy: 0.2045

The information below is about IL_7RQB_023

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.6

Basepair signature

cWW-cWW

Number of instances in this motif group

7

Unit IDs

6I7V|1|CA|G|775
6I7V|1|CA|G|776
6I7V|1|CA|G|777
*
6I7V|1|CA|C|787
6I7V|1|CA|A|788
6I7V|1|CA|A|789
6I7V|1|CA|U|790
6I7V|1|CA|C|791

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C3

50S ribosomal protein L34

Chain CC

50S ribosomal protein L2

Chain CT

50S ribosomal protein L22