3D structure

PDB id
6I7V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosomal protein paralogs bL31 and bL36
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
6I7V|1|CA|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6I7V_155 not in the Motif Atlas
Homologous match to IL_5J7L_277
Geometric discrepancy: 0.1294
The information below is about IL_5J7L_277
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

6I7V|1|CA|C|998
6I7V|1|CA|U|999
6I7V|1|CA|A|1000
6I7V|1|CA|A|1001
6I7V|1|CA|G|1002
*
6I7V|1|CA|C|1153
6I7V|1|CA|G|1154
6I7V|1|CA|A|1155
6I7V|1|CA|A|1156
6I7V|1|CA|G|1157

Current chains

Chain CA
23S ribsomal RNA

Nearby chains

Chain C0
50S ribosomal protein L30
Chain CB
5S ribosomal RNA; 5S rRNA
Chain CR
50S ribosomal protein L20
Chain CS
50S ribosomal protein L21

Coloring options:


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