IL_6I7V_157

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

6I7V|1|CA|U|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_157 not in the Motif Atlas

Homologous match to IL_5J7L_279

Geometric discrepancy: 0.1233

The information below is about IL_5J7L_279

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

6I7V|1|CA|G|1011
6I7V|1|CA|U|1012
6I7V|1|CA|C|1013
*
6I7V|1|CA|G|1149
6I7V|1|CA|C|1150

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CK

50S ribosomal protein L13

Chain CR

50S ribosomal protein L20