IL_6I7V_222

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

6I7V|1|CA|C|2712, 6I7V|1|CA|U|2713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_222 not in the Motif Atlas

Homologous match to IL_5J7L_349

Geometric discrepancy: 0.133

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

6I7V|1|CA|U|2695
6I7V|1|CA|U|2696
*
6I7V|1|CA|A|2711
6I7V|1|CA|C|2712
6I7V|1|CA|U|2713
6I7V|1|CA|G|2714

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CO

50S ribosomal protein L17

Chain CQ

50S ribosomal protein L19