IL_6I7V_240

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_240 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.0988

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

6I7V|1|DA|C|269
6I7V|1|DA|A|270
6I7V|1|DA|G|271
*
6I7V|1|DA|C|366
6I7V|1|DA|G|367
6I7V|1|DA|A|368
6I7V|1|DA|U|369
6I7V|1|DA|G|370

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DY

50S ribosomal protein L28