IL_6I7V_243

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

6I7V|1|DA|A|504, 6I7V|1|DA|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_243 not in the Motif Atlas

Geometric match to IL_5J7L_255

Geometric discrepancy: 0.0546

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

6I7V|1|DA|G|481
6I7V|1|DA|A|482
6I7V|1|DA|A|483
6I7V|1|DA|C|484
*
6I7V|1|DA|G|496
6I7V|1|DA|A|497
6I7V|1|DA|G|498
6I7V|1|DA|U|499
6I7V|1|DA|G|500
6I7V|1|DA|A|501
6I7V|1|DA|A|502
6I7V|1|DA|A|503
6I7V|1|DA|A|504
6I7V|1|DA|A|505
6I7V|1|DA|G|506
6I7V|1|DA|A|507
6I7V|1|DA|A|508
6I7V|1|DA|C|509

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DT

50S ribosomal protein L22

Chain DV

50S ribosomal protein L24