IL_6I7V_296

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

6I7V|1|DA|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_296 not in the Motif Atlas

Homologous match to IL_5J7L_308

Geometric discrepancy: 0.0856

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

6I7V|1|DA|C|1686
6I7V|1|DA|G|1687
6I7V|1|DA|U|1688
6I7V|1|DA|A|1689
6I7V|1|DA|A|1690
6I7V|1|DA|C|1691
*
6I7V|1|DA|G|1696
6I7V|1|DA|G|1697
6I7V|1|DA|A|1698
6I7V|1|DA|G|1699
6I7V|1|DA|A|1700
6I7V|1|DA|A|1701
6I7V|1|DA|G|1702

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain DC

50S ribosomal protein L2