IL_6I7V_340

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_340 not in the Motif Atlas

Homologous match to IL_5J7L_354

Geometric discrepancy: 0.0813

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

6I7V|1|DA|U|2847
6I7V|1|DA|G|2848
6I7V|1|DA|U|2849
6I7V|1|DA|A|2850
6I7V|1|DA|A|2851
6I7V|1|DA|G|2852
*
6I7V|1|DA|U|2865
6I7V|1|DA|U|2866
6I7V|1|DA|G|2867
6I7V|1|DA|A|2868
6I7V|1|DA|G|2869

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DO

50S ribosomal protein L17

Chain DQ

50S ribosomal protein L19