IL_6I7V_349

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAC*GUAC

Length

7 nucleotides

Bulged bases

6I7V|1|AA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_349 not in the Motif Atlas

Geometric match to IL_4V9F_097

Geometric discrepancy: 0.2434

The information below is about IL_4V9F_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

6I7V|1|AA|G|922
6I7V|1|AA|A|923
6I7V|1|AA|C|924
*
6I7V|1|AA|G|1392
6I7V|1|AA|U|1393
6I7V|1|AA|A|1394
6I7V|1|AA|C|1395

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AE

30S ribosomal protein S5