IL_6I7V_375

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

6I7V|1|CA|U|846, 6I7V|1|CA|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_375 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.3189

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

6I7V|1|CA|A|844
6I7V|1|CA|A|845
6I7V|1|CA|U|846
6I7V|1|CA|U|847
6I7V|1|CA|C|848
*
6I7V|1|CA|G|930
6I7V|1|CA|U|931
6I7V|1|CA|U|932
6I7V|1|CA|A|933
6I7V|1|CA|U|934

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C0

50S ribosomal protein L30