IL_6I7V_377

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGGAAACGAUG*CGCGGAAGAUGUAACGGGGC

Length

31 nucleotides

Bulged bases

6I7V|1|CA|U|1033, 6I7V|1|CA|A|1127, 6I7V|1|CA|U|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7V|1|CA|G|1024
6I7V|1|CA|G|1025
6I7V|1|CA|G|1026
6I7V|1|CA|A|1027
6I7V|1|CA|A|1028
6I7V|1|CA|A|1029
6I7V|1|CA|C|1030
6I7V|1|CA|G|1031
6I7V|1|CA|A|1032
6I7V|1|CA|U|1033
6I7V|1|CA|G|1034
*
6I7V|1|CA|C|1121
6I7V|1|CA|G|1122
6I7V|1|CA|C|1123
6I7V|1|CA|G|1124
6I7V|1|CA|G|1125
6I7V|1|CA|A|1126
6I7V|1|CA|A|1127
6I7V|1|CA|G|1128
6I7V|1|CA|A|1129
6I7V|1|CA|U|1130
6I7V|1|CA|G|1131
6I7V|1|CA|U|1132
6I7V|1|CA|A|1133
6I7V|1|CA|A|1134
6I7V|1|CA|C|1135
6I7V|1|CA|G|1136
6I7V|1|CA|G|1137
6I7V|1|CA|G|1138
6I7V|1|CA|G|1139
6I7V|1|CA|C|1140

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C5

50S ribosomal protein L36 2

Chain CB

5S ribosomal RNA; 5S rRNA

Chain CD

50S ribosomal protein L3

Chain CK

50S ribosomal protein L13

Chain CN

50S ribosomal protein L16