IL_6I7V_384

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUC*GGC

Length

7 nucleotides

Bulged bases

6I7V|1|CA|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_384 not in the Motif Atlas

Geometric match to IL_1U6B_001

Geometric discrepancy: 0.2518

The information below is about IL_1U6B_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_42997.4

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

21

Unit IDs

6I7V|1|CA|G|2400
6I7V|1|CA|U|2401
6I7V|1|CA|U|2402
6I7V|1|CA|C|2403
*
6I7V|1|CA|G|2414
6I7V|1|CA|G|2415
6I7V|1|CA|C|2416

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C2

50S ribosomal protein L33

Chain C4

50S ribosomal protein L35

Chain CM

50S ribosomal protein L15