3D structure

PDB id
6I7V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosomal protein paralogs bL31 and bL36
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
UACAAAGAGAAG*CGGACCUCAUAAAG
Length
26 nucleotides
Bulged bases
6I7V|1|BA|A|1257, 6I7V|1|BA|A|1280, 6I7V|1|BA|C|1281, 6I7V|1|BA|U|1286
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6I7V|1|BA|U|1247
6I7V|1|BA|A|1248
6I7V|1|BA|C|1249
6I7V|1|BA|A|1250
6I7V|1|BA|A|1251
6I7V|1|BA|A|1252
6I7V|1|BA|G|1253
6I7V|1|BA|A|1254
6I7V|1|BA|G|1255
6I7V|1|BA|A|1256
6I7V|1|BA|A|1257
6I7V|1|BA|G|1258
*
6I7V|1|BA|C|1277
6I7V|1|BA|G|1278
6I7V|1|BA|G|1279
6I7V|1|BA|A|1280
6I7V|1|BA|C|1281
6I7V|1|BA|C|1282
6I7V|1|BA|U|1283
6I7V|1|BA|C|1284
6I7V|1|BA|A|1285
6I7V|1|BA|U|1286
6I7V|1|BA|A|1287
6I7V|1|BA|A|1288
6I7V|1|BA|A|1289
6I7V|1|BA|G|1290

Current chains

Chain BA
16S ribosomal RNA

Nearby chains

Chain BC
30S ribosomal protein S3
Chain BG
30S ribosomal protein S7
Chain BI
30S ribosomal protein S9
Chain BJ
30S ribosomal protein S10
Chain BN
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0824 s