3D structure

PDB id
6I9R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUUAUAACCAAG
Length
27 nucleotides
Bulged bases
6I9R|1|A|A|1804
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6I9R|1|A|C|1672
6I9R|1|A|U|1673
6I9R|1|A|A|1674
6I9R|1|A|A|1675
6I9R|1|A|A|1676
6I9R|1|A|C|1677
6I9R|1|A|C|1678
*
6I9R|1|A|G|1797
6I9R|1|A|A|1798
6I9R|1|A|U|1799
6I9R|1|A|G|1800
6I9R|1|A|A|1801
6I9R|1|A|A|1802
6I9R|1|A|A|1803
6I9R|1|A|A|1804
6I9R|1|A|A|1805
6I9R|1|A|U|1806
6I9R|1|A|U|1807
6I9R|1|A|A|1808
6I9R|1|A|U|1809
6I9R|1|A|A|1810
6I9R|1|A|A|1811
6I9R|1|A|C|1812
6I9R|1|A|C|1813
6I9R|1|A|A|1814
6I9R|1|A|A|1815
6I9R|1|A|G|1816

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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