3D structure

PDB id
6I9R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GCAAAUCUUA*UUCAGC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6I9R|1|A|G|2478
6I9R|1|A|C|2479
6I9R|1|A|A|2480
6I9R|1|A|A|2481
6I9R|1|A|A|2482
6I9R|1|A|U|2483
6I9R|1|A|C|2484
6I9R|1|A|U|2485
6I9R|1|A|U|2486
6I9R|1|A|A|2487
*
6I9R|1|A|U|2648
6I9R|1|A|U|2649
6I9R|1|A|C|2650
6I9R|1|A|A|2651
6I9R|1|A|G|2652
6I9R|1|A|C|2653

Current chains

Chain A
16S rRNA

Nearby chains

Chain E
39S ribosomal protein L3, mitochondrial
Chain L
39S ribosomal protein L14, mitochondrial
Chain Q
39S ribosomal protein L19, mitochondrial

Coloring options:

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